BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C08LP1|AL429192
(976 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 1290 0.0
3x_Contig1573 296 6e-80
>3x_Contig1713
Length = 18539
Score = 1290 bits (650), Expect = 0.0
Identities = 675/682 (98%), Gaps = 1/682 (0%)
Strand = Plus / Minus
Query: 1 ggctggtctagagaatgttcttttgcctagtgatctagcttaggtttcatattacgtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ggctggtctagagaatgttcttttgcctagtgatctagcttaggtttcatattacgtttg 641
Query: 61 acaaatggcgaatggtaaagtaatagacaaatagacataggaaattacaaagtatagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 acaaatggcgaatggtaaagtaatagacaaatagacataggaaattacaaagtatagtag 581
Query: 121 tagtagtagtagtagtagtagtagtagttgtagtagttgtagtagaatacagatagatat 180
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 580 tagtagtagtagtagtagtagtagtagtagtagtagtagtagtagaatacagatagatat 521
Query: 181 atcaaatcagatacacagatagagaaggtgaacaataagaataagaaaggggcacagtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 atcaaatcagatacacagatagagaaggtgaacaataagaataagaaaggggcacagtat 461
Query: 241 ggtatggggaaattggaaatatctcttttccatcgttttttttttctctcactcttcttc 300
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 460 ggtatggggaaattggaaatatgtattttccatcgttttttttttctctcactcttcttc 401
Query: 301 ggttggatcttcgataccagcctctttcaatttcttttttagctcttcgaggttcttgta 360
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 400 ggttggatcttcgataccagcctctttcaatttattttttagctcttcgaggttgttgta 341
Query: 361 ggccttcgatagttcttgctccaacttgtcgttggcactggttaacgatgaaacttgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggccttcgatagttcttgctccaacttgtcgttggcactggttaacgatgaaacttgttg 281
Query: 421 ttctcccaatagcttttgtagagtccatttttcgatgtttgctgtttctgtttccttcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttctcccaatagcttttgtagagtccatttttcgatgtttgctgtttctgtttccttcat 221
Query: 481 cttttggatatactctgcggcacgtgacaagattgcggccttgcttgtttccttcactgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cttttggatatactctgcggcacgtgacaagattgcggccttgcttgtttccttcactgg 161
Query: 541 caacaaatcgcttagtttttcaatggcagtgttgatgttttgacgacgtcttctttccac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 caacaaatcgcttagtttttcaatggcagtgttgatgttttgacgacgtcttctttccac 101
Query: 601 ttccttgtgagattctttgcgttgttgtttccaggctgtggatccggtctctgtgcctgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ttccttgtgagattctttgcgttgttgtttccaggctgtggatccggtctctgtgcctgg 41
Query: 661 ctttctgcctct-gcgtggtgc 681
|||||||||||| |||||||||
Sbjct: 40 ctttctgcctctcgcgtggtgc 19
>3x_Contig1573
Length = 10819
Score = 296 bits (149), Expect = 6e-80
Identities = 218/232 (93%), Gaps = 9/232 (3%)
Strand = Plus / Minus
Query: 748 tcttcacggtcaccgctaccatccgcaccggcagtttcgtttgatgatccggattctcca 807
|||||||| |||| |||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 10818 tcttcacgttcac-gctaccatccgcaccggc-gtttcgttgga-gatccggattctcca 10762
Query: 808 attttcgtagcacgctccgaatcgttagawtcgccggttccctcgatgttcttcttacca 867
||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 10761 attttcgta-cacgctcggaatcgttagattcgccggttccctcgatgttcttcttacca 10703
Query: 868 cgacgacgctgggcttgatcctcgtcttcttcgtcgtcgtcctcatcaatgacagcatct 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10702 cgacgacgctgggcttgatcctcgtcttcttcgtcgtcgtcctcatcaatgacagcatct 10643
Query: 928 gggtc--ttgtcgacatcgt-gatgt-cacgtgatcatcc-catcytcttct 974
||||| ||||||||||||| ||||| ||||||||||||| |||| ||||||
Sbjct: 10642 gggtcctttgtcgacatcgtcgatgtccacgtgatcatcctcatcttcttct 10591
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8709
Number of Sequences: 1807
Number of extensions: 8709
Number of successful extensions: 165
Number of sequences better than 1.0e-20: 2
length of query: 976
length of database: 10,358,551
effective HSP length: 16
effective length of query: 960
effective length of database: 10,329,639
effective search space: 9916453440
effective search space used: 9916453440
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)